RetrogeneDB ID: | retro_etel_755 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_159162:3406..3782(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 80.47 % |
Parental protein coverage: | 98.44 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MQIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL |
MQIF.KTLTG.TITL..EP.DT.IENVKAKIQDKEGIP.DQQR...A.KQLEDGR.LSDYNIQKE.TLHL | |
Retrocopy | MQIFEKTLTGQTITLVGEPCDT<IENVKAKIQDKEGIPLDQQRRSSASKQLEDGRMLSDYNIQKETTLHL |
Parental | VLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLH-PRAVNCRKKKCGHTNNLRPKKK |
VLRLRGGII.PSLRQLA.KYN.DK.I...CYARLH.P.AVNCR.K.CG.TNNLRPKKK | |
Retrocopy | VLRLRGGIIKPSLRQLAPKYNYDKIIDLQCYARLH<PCAVNCRIKECGPTNNLRPKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |