RetrogeneDB ID: | retro_lafr_286 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_11:23952172..23952651(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000017669 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.82 % |
Parental protein coverage: | 99.39 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKK-VGDDIAKATGDWKGLRITVKLTIQNRQA |
MPPKF.P.EI.VVYLRC..GEV.ATSALAPKI.PLGLSPK..VGDDIAKATGDWK..RI.VKLTIQNR.A | |
Retrocopy | MPPKFEPSEIEVVYLRCPSGEVSATSALAPKISPLGLSPKQ<VGDDIAKATGDWKRPRIRVKLTIQNRHA |
Parental | QIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVGIARQMRHRSLARELSGTIKEILGTAQSV |
QI.VV.SA.ALIIK.LK.PPRDRKKQKNIKHSGNITFDEIVGI..QM.HRSLARELSGTIKE..GTAQS. | |
Retrocopy | QIAVVTSAFALIIKVLK*PPRDRKKQKNIKHSGNITFDEIVGITCQMQHRSLARELSGTIKETFGTAQSL |
Parental | GCNVDGRHPHDIIDDINSGAVECPA |
GCNVDG.HPHDI....NSGA.ECPA | |
Retrocopy | GCNVDGHHPHDI----NSGALECPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |