RetrogeneDB - Parental gene ENSLAFG00000017669 details

                            
>ENSLAFG00000017669
GAGGAGGCCTCGGTGCAACTTTCCTCGGTCGTCCCGCATCTGGGTTCATCCGACACCAGGCGCCTCCGCCATGCCGCCGA

AGTTCGACCCCAACGAGATCAAAGTCGGTGGCCCCCGCCGCGATTGCCTTTCCCATGTGGGTCTCTAAGGCCTTGGCCTT

CTGGAGGCCTTCTCGGAGCTTCGCTTCCCCACACGTGTAAATGGGGAGGGGGACCGGACGACCTGTGGTTGCCGAGCCGA

AGCCGCTGCTCCGCCCCCGGGAAGATGCAGGGAGAGGGCTCTGGGGGGGGCTGTCTTTGCAGAAGCACTAACCCTTTTTT

TCTCCCAGTGTACCTGAGGTGCACCGGTGGGGAAGTCGGTGCCACGTCTGCTCTAGCCCCCAAGATCGGCCCCTTGGGTC

TGTCTCCAAAAAAGGTTGGTGATGACATTGCCAAGGCAACTGGTGACTGGAAGGGACTGAGGATTACGGTGAAACTGACC

ATTCAGAACAGACAGGCTCAGATTGAAGTGGTGCCCTCCGCCTCTGCCCTGATCATCAAAGCCCTCAAAGAACCACCCAG

AGACAGAAAGAAGCAGAAAAACAGTGAG

Species	Parental gene accession	Homology type	Retrogenes number
Choloepus hoffmanni	ENSCHOG00000006732	ortholog_one2many	32 retrogenes	retro_chof_1081, retro_chof_129, retro_chof_145, retro_chof_1469, retro_chof_147, retro_chof_1531, retro_chof_156, retro_chof_1666, retro_chof_1724, retro_chof_1843, retro_chof_1886, retro_chof_197, retro_chof_1992, retro_chof_2080, retro_chof_2152, retro_chof_2169, retro_chof_2279, retro_chof_2318, retro_chof_249, retro_chof_2599, retro_chof_2614, retro_chof_2656, retro_chof_295, retro_chof_310, retro_chof_354, retro_chof_386, retro_chof_484, retro_chof_592, retro_chof_677, retro_chof_831, retro_chof_916, retro_chof_925,
Dasypus novemcinctus	ENSDNOG00000008412	possible_ortholog	48 retrogenes	retro_dnov_1021, retro_dnov_1039, retro_dnov_1105, retro_dnov_1111, retro_dnov_1291, retro_dnov_1292, retro_dnov_1339, retro_dnov_1355, retro_dnov_1383, retro_dnov_1387, retro_dnov_1408, retro_dnov_1636, retro_dnov_1658, retro_dnov_1695, retro_dnov_1711, retro_dnov_1884, retro_dnov_2053, retro_dnov_2055, retro_dnov_2058, retro_dnov_210, retro_dnov_2165, retro_dnov_2196, retro_dnov_2199, retro_dnov_2222, retro_dnov_231, retro_dnov_2370, retro_dnov_2430, retro_dnov_2452, retro_dnov_2485, retro_dnov_2490, retro_dnov_260, retro_dnov_2603, retro_dnov_2637, retro_dnov_2639, retro_dnov_330, retro_dnov_343, retro_dnov_368, retro_dnov_387, retro_dnov_395, retro_dnov_455, retro_dnov_552, retro_dnov_560, retro_dnov_590, retro_dnov_597, retro_dnov_614, retro_dnov_634, retro_dnov_654, retro_dnov_677,
Latimeria chalumnae	ENSLACG00000015373	ortholog_one2many	3 retrogenes	retro_lcha_31, retro_lcha_87, retro_lcha_92,
Macropus eugenii	ENSMEUG00000007380	possible_ortholog	12 retrogenes	retro_meug_1102, retro_meug_1107, retro_meug_1199, retro_meug_1357, retro_meug_1426, retro_meug_1611, retro_meug_1634, retro_meug_1691, retro_meug_1953, retro_meug_265, retro_meug_479, retro_meug_493,
Monodelphis domestica	ENSMODG00000004571	possible_ortholog	9 retrogenes	retro_mdom_1061, retro_mdom_1177, retro_mdom_1192, retro_mdom_1526, retro_mdom_1719, retro_mdom_1871, retro_mdom_1947, retro_mdom_309, retro_mdom_925,
Otolemur garnettii	ENSOGAG00000000597	possible_ortholog	120 retrogenes	retro_ogar_1002, retro_ogar_1010, retro_ogar_1049, retro_ogar_1069, retro_ogar_1106, retro_ogar_1117, retro_ogar_1137, retro_ogar_1140, retro_ogar_1181, retro_ogar_1188, retro_ogar_1189, retro_ogar_1192, retro_ogar_1230, retro_ogar_1247, retro_ogar_1263, retro_ogar_1295, retro_ogar_1331, retro_ogar_1341, retro_ogar_1408, retro_ogar_1409, retro_ogar_1427, retro_ogar_1457, retro_ogar_1464, retro_ogar_1489, retro_ogar_1503, retro_ogar_1534, retro_ogar_1536, retro_ogar_1550, retro_ogar_1569, retro_ogar_1570, retro_ogar_1579, retro_ogar_1606, retro_ogar_1621, retro_ogar_1709, retro_ogar_1717, retro_ogar_1739, retro_ogar_1789, retro_ogar_1803, retro_ogar_1810, retro_ogar_1825, retro_ogar_1836, retro_ogar_1881, retro_ogar_1885, retro_ogar_1916, retro_ogar_1923, retro_ogar_1937, retro_ogar_1941, retro_ogar_1948, retro_ogar_1969, retro_ogar_1975, retro_ogar_1987, retro_ogar_2055, retro_ogar_2115, retro_ogar_2134, retro_ogar_2172, retro_ogar_2179, retro_ogar_2180, retro_ogar_2208, retro_ogar_2209, retro_ogar_2230, retro_ogar_2291, retro_ogar_2323, retro_ogar_2387, retro_ogar_2483, retro_ogar_2495, retro_ogar_2511, retro_ogar_2570, retro_ogar_2620, retro_ogar_2622, retro_ogar_2624, retro_ogar_2749, retro_ogar_2768, retro_ogar_2809, retro_ogar_2904, retro_ogar_2935, retro_ogar_2945, retro_ogar_2953, retro_ogar_2980, retro_ogar_3004, retro_ogar_3017, retro_ogar_303, retro_ogar_3035, retro_ogar_3128, retro_ogar_3135, retro_ogar_3164, retro_ogar_3394, retro_ogar_3489, retro_ogar_395, retro_ogar_398, retro_ogar_412, retro_ogar_427, retro_ogar_452, retro_ogar_480, retro_ogar_512, retro_ogar_513, retro_ogar_538, retro_ogar_560, retro_ogar_587, retro_ogar_624, retro_ogar_636, retro_ogar_653, retro_ogar_655, retro_ogar_667, retro_ogar_668, retro_ogar_669, retro_ogar_683, retro_ogar_700, retro_ogar_734, retro_ogar_737, retro_ogar_744, retro_ogar_747, retro_ogar_775, retro_ogar_818, retro_ogar_853, retro_ogar_868, retro_ogar_901, retro_ogar_927, retro_ogar_956, retro_ogar_962, retro_ogar_964,
Procavia capensis	ENSPCAG00000007469	possible_ortholog	3 retrogenes	retro_pcap_135, retro_pcap_253, retro_pcap_306,
Rattus norvegicus	ENSRNOG00000016220	possible_ortholog	4 retrogenes	retro_rnor_166, retro_rnor_236, retro_rnor_247, retro_rnor_312,
Sarcophilus harrisii	ENSSHAG00000017864	possible_ortholog	8 retrogenes	retro_shar_140, retro_shar_266, retro_shar_284, retro_shar_335, retro_shar_346, retro_shar_453, retro_shar_508, retro_shar_646,
Tursiops truncatus	ENSTTRG00000015700	possible_ortholog	15 retrogenes	retro_ttru_1215, retro_ttru_1328, retro_ttru_1356, retro_ttru_1373, retro_ttru_1390, retro_ttru_1449, retro_ttru_1685, retro_ttru_1847, retro_ttru_187, retro_ttru_1942, retro_ttru_342, retro_ttru_421, retro_ttru_536, retro_ttru_65, retro_ttru_774,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_lafr_1	95.12	99.39	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_lafr_8	94.48	98.79	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_lafr_41	94.51	99.39	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_lafr_193	80.00	99.39	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_lafr_204	73.03	90.30	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_lafr_286	81.82	99.39	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_lafr_342	54.81	63.03	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_lafr_802	70.25	72.73	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_lafr_830	70.31	76.36	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_lafr_984	71.32	81.82	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSLAFG00000017669 retrocopies

Parental gene:	ENSLAFG00000017669
Aliases:	None
Description:	None
Organism:	*Elephant (Loxodonta africana)*
Coordinates:	scaffold_6:30611700..30615425(+)

Parental gene:

ENSLAFG00000017669