RetrogeneDB ID: | retro_lafr_984 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_56:12325458..12325862(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000017669 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.32 % |
Parental protein coverage: | 81.82 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQN-RQA |
MP.KFDPN.IKV.YLR.T.GEV...S.LAPKIGPLG.SP.KVGDDIAKAT...K..RI.VK..IQ..R.A | |
Retrocopy | MPLKFDPNKIKVTYLRYTKGEVSGMSTLAPKIGPLGVSPEKVGDDIAKATSY*KCSRIIVKQAIQK<R*A |
Parental | QIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVGIARQMRHRSLARELSGTIKEILGT |
QIEVVPSAS.LI..ALKEPPR..K.QKN.K...NITFDEIV.IA..M.H.SLAREL.G.IKEILGT | |
Retrocopy | QIEVVPSASDLILEALKEPPRETKNQKNSKQVKNITFDEIVNIAQLMQHQSLARELCGNIKEILGT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |