RetrogeneDB ID: | retro_mdom_61 | ||
Retrocopylocation | Organism: | Opossum (Monodelphis domestica) | |
Coordinates: | 2:516078301..516078565(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMODG00000023171 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMODG00000000393 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.75 % |
Parental protein coverage: | 95.24 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EFDKAAAEVKVLKSKPNDDEMLYIYSHFKQATVGDVNTARPGITDFKGKAKWDAWNSLKGKSKEDAIKAY |
EF..A.A.VK.L.....D.E.L..YS..KQATVGD.N...P..TDFK.KAKW.AWN..KG.SK.DA...Y | |
Retrocopy | EFELACATVKQLTGPVSDEEKLLVYSYYKQATVGDINIPCPEVTDFKAKAKWEAWNCRKGMSKLDAMRIY |
Parental | IEKVEELKKK |
..KVEELKKK | |
Retrocopy | VSKVEELKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain | 0 .00 RPM | 0 .00 RPM |
SRP007412_cerebellum | 0 .00 RPM | 0 .00 RPM |
SRP007412_heart | 0 .00 RPM | 0 .00 RPM |
SRP007412_kidney | 0 .00 RPM | 0 .00 RPM |
SRP007412_liver | 0 .00 RPM | 0 .00 RPM |
SRP007412_testis | 0 .00 RPM | 0 .00 RPM |