RetrogeneDB ID: | retro_meug_396 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold109357:5438..6042(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMA16 | ||
Ensembl ID: | ENSMEUG00000001134 | ||
Aliases: | None | ||
Description: | translation machinery associated 16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25638] |
Percent Identity: | 87.19 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PKSLKGKSSGQQKKVVHPYSRKAAQLNREAHKQERKEKLKNEKALRLNIIGEKLQWFQSHLDPHKREYTK |
PKSLKGKSSGQQKKV.H.YSRKAAQLN.EAHK.ERKEKLKNEK.LRLNIIG.KLQWFQSHLDPHKREYTK | |
Retrocopy | PKSLKGKSSGQQKKVLHLYSRKAAQLNQEAHK*ERKEKLKNEKTLRLNIIGKKLQWFQSHLDPHKREYTK |
Parental | KDACELIESYLHRFDSELEQIELQNSIKGRQGRRHFSRETVIKQTVERERKRYEGYGMEIPDIVNAKHLR |
KDACELI.SYLHRFDSELEQIELQN.IKGRQGRRHFS.ETVIKQ.VERE.KRYEGYGMEIPD.VNAKH.R | |
Retrocopy | KDACELIKSYLHRFDSELEQIELQNGIKGRQGRRHFSQETVIKQMVEREQKRYEGYGMEIPDAVNAKHPR |
Parental | TFREWDGDLKKLPNIMMRKFCANDGISNKDKKKDIVSTEVDLGEIE-SQDGSDDSDEEMPEVA |
TFREWD.DLKKLPNI.MRKFCANDGISN.DKKKDIVSTEVDLGEIE......D...E.MPEVA | |
Retrocopy | TFREWDNDLKKLPNIKMRKFCANDGISNNDKKKDIVSTEVDLGEIE>QDGSDDSDKE-MPEVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |