RetrogeneDB ID: | retro_mluc_2175 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430077:326221..326661(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000003720 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000006793 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.81 % |
Parental protein coverage: | 80.22 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPP-VD-DPQSGELPSERWNPTQNVRTILLSVISLLN |
PID.P.SPPTFRFLTK.WHPNIYENGDV.ISILHPP.VD.DPQS.ELPSERWNP.Q.VRT.LLSV.SLLN | |
Retrocopy | PIDHPHSPPTFRFLTKTWHPNIYENGDVGISILHPP<VDGDPQSRELPSERWNPAQKVRTTLLSVVSLLN |
Parental | EPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDGVKVPTTLAEYCIKTKVPSNDNS |
EPN.FSPANVDASVMFRKWRDSKGKD.EYA.I..KQVSATKAEAEKDGV.VP.TLA.YCIKTKVPSN.NS | |
Retrocopy | EPNPFSPANVDASVMFRKWRDSKGKDEEYADIVKKQVSATKAEAEKDGVQVPATLAGYCIKTKVPSNYNS |
Parental | SDLLYDDL |
SDLLYD.L | |
Retrocopy | SDLLYDAL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000031810 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000007589 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000011574 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000002118 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000006793 | 1 retrocopy |
retro_mluc_2175 ,
|
Monodelphis domestica | ENSMODG00000003686 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000005052 | 3 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000023588 | 3 retrocopies | |
Otolemur garnettii | ENSOGAG00000029045 | 3 retrocopies | |
Rattus norvegicus | ENSRNOG00000010727 | 1 retrocopy | |
Sorex araneus | ENSSARG00000005734 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000013265 | 7 retrocopies | |
Tursiops truncatus | ENSTTRG00000010587 | 1 retrocopy |