RetrogeneDB ID: | retro_mputfur_671 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896933.1:5718422..5718776(-) | ||
Located in intron of: | ENSMPUG00000004095 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS25 | ||
Ensembl ID: | ENSMPUG00000004960 | ||
Aliases: | None | ||
Description: | ribosomal protein S25 [Source:HGNC Symbol;Acc:10413] |
Percent Identity: | 79.34 % |
Parental protein coverage: | 95.2 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSER |
K.KKDA.KS.KK.KDPVNK...K.KKK..SKGKV..KLNNLVLFDKA.YDKL.KEV..YKLIT.AVVSER | |
Retrocopy | KDKKDARKSTKKEKDPVNKTWAKTKKK*-SKGKVQRKLNNLVLFDKARYDKLYKEVLSYKLITSAVVSER |
Parental | LKIRGS-LARAALQELLSKGLIKLVS-KHRAQVIYTRNTKGGDAPAAGEDA |
LKI.GS.LARAAL.E.LSK.L.KLVS.KHRAQVIYTRNTKGGD.PAAGEDA | |
Retrocopy | LKIQGS<LARAALHEFLSKKLMKLVS>KHRAQVIYTRNTKGGDNPAAGEDA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000000051 | 5 retrocopies | |
Canis familiaris | ENSCAFG00000012395 | 3 retrocopies | |
Cavia porcellus | ENSCPOG00000013298 | 2 retrocopies | |
Felis catus | ENSFCAG00000001151 | 3 retrocopies | |
Loxodonta africana | ENSLAFG00000017117 | 6 retrocopies | |
Microcebus murinus | ENSMICG00000002687 | 8 retrocopies | |
Myotis lucifugus | ENSMLUG00000004752 | 15 retrocopies | |
Monodelphis domestica | ENSMODG00000013334 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000004960 | 4 retrocopies | |
Sus scrofa | ENSSSCG00000015103 | 12 retrocopies |