RetrogeneDB ID: | retro_mluc_1541 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429858:2657337..2657701(+) | ||
Located in intron of: | ENSMLUG00000010910 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000004752 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.02 % |
Parental protein coverage: | 99.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | PPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKK-WSKGKVRDKLNNLVLFDKATYDKL-CKEVPNY-KLI |
PPK...K..D.GKSAKKDKDP.NKSGGKAK....WSKGKV.DK.NNLV..DKAT.....C..VPNY.KLI | |
Retrocopy | PPKVNNK--DNGKSAKKDKDPMNKSGGKAKIRR<WSKGKVQDKFNNLV*SDKATL*QT<CNKVPNYNKLI |
Parental | TPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPAAGEDA |
.P.V..ERLKI..SLARAA.QELLSKGLIKLVSKHRAQVIYTRNTKGGDA.A..EDA | |
Retrocopy | SPTVSLERLKIHSSLARAAFQELLSKGLIKLVSKHRAQVIYTRNTKGGDASAV-EDA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000000051 | 5 retrocopies | |
Canis familiaris | ENSCAFG00000012395 | 3 retrocopies | |
Cavia porcellus | ENSCPOG00000013298 | 2 retrocopies | |
Felis catus | ENSFCAG00000001151 | 3 retrocopies | |
Latimeria chalumnae | ENSLACG00000017531 | 4 retrocopies | |
Loxodonta africana | ENSLAFG00000017117 | 6 retrocopies | |
Macropus eugenii | ENSMEUG00000014185 | 3 retrocopies | |
Microcebus murinus | ENSMICG00000002687 | 8 retrocopies | |
Myotis lucifugus | ENSMLUG00000004752 | 15 retrocopies | |
Monodelphis domestica | ENSMODG00000013334 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000004960 | 4 retrocopies | |
Ochotona princeps | ENSOPRG00000016194 | 9 retrocopies | |
Sus scrofa | ENSSSCG00000015103 | 12 retrocopies | |
Vicugna pacos | ENSVPAG00000000266 | 4 retrocopies |