RetrogeneDB ID: | retro_nleu_1693 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397305.1:1687821..1688111(+) | ||
Located in intron of: | ENSNLEG00000008065 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSNLEG00000026739 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 82.65 % |
Parental protein coverage: | 69.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHG-VAQVRFVTGNKILRILKSKG |
L...ALPYRRS.PT.LKL.SDD.KEQIYKLAKKGLTPSQI.VILRD....VAQVRFVTGN.ILRILKSKG | |
Retrocopy | LPGGALPYRRSIPTQLKLVSDDMKEQIYKLAKKGLTPSQISVILRDARV<VAQVRFVTGNEILRILKSKG |
Parental | LAPDLPEDLYHLIKKAVAVRKHLERNRK |
LA.DLP.DLYHLIKKAVAV.KHLE.NRK | |
Retrocopy | LALDLPDDLYHLIKKAVAV*KHLEQNRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |