RetrogeneDB ID: | retro_ogar_2500 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873629.1:1449046..1449817(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000029224 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000011740 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.22 % |
Parental protein coverage: | 52.34 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSIRVTQKSYKVSTSAPRAFSSRSYSSGPGARISSSSFSRVGSGSFRSGLSTGLGLGGGYAGAGGMGGIT |
MSIRVTQKSYKVSTS..RAFSS.SYSSGPGA.ISSSSFS.VGSGSFRSGL.T.LGLGGGYAGAGG.GGIT | |
Retrocopy | MSIRVTQKSYKVSTSTSRAFSSHSYSSGPGAHISSSSFSWVGSGSFRSGLDTSLGLGGGYAGAGGIGGIT |
Parental | AVTVNQSLLSPLNLEVDPNIQAVRTQEKEEIKTLNNKFASFIDKVRFLEQQNKMLETKWNLLQQQKTARS |
AVTVNQSLLS.LNLEVDP.IQAV.TQEKEEIKTLNNKFASFIDKVRFLEQQNKMLETKWNLLQQQKT.RS | |
Retrocopy | AVTVNQSLLSALNLEVDPSIQAVHTQEKEEIKTLNNKFASFIDKVRFLEQQNKMLETKWNLLQQQKTDRS |
Parental | NMDSMFESYINNLRRQLDTLGQEKLKLEAELGNMQGLVEDFKNKYEEEINKRTEMENEFVLIKKDVDEAY |
NMDSMFESYINNL..QLDTLGQEKLKLEAELGNMQGLVEDFKNK.EEEINKR.EMENEFVLIKKDVDE.Y | |
Retrocopy | NMDSMFESYINNLWQQLDTLGQEKLKLEAELGNMQGLVEDFKNKFEEEINKRAEMENEFVLIKKDVDEVY |
Parental | MNKVELESRLDGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNS |
MNKVELES.LDGLTDEINFLRQLYEEEI.ELQSQISDT.VVLSMDNS | |
Retrocopy | MNKVELESCLDGLTDEINFLRQLYEEEIPELQSQISDTCVVLSMDNS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |