RetrogeneDB ID: | retro_tbel_4136 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_68413:1552..1811(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TOMM20 | ||
Ensembl ID: | ENSTBEG00000003827 | ||
Aliases: | None | ||
Description: | translocase of outer mitochondrial membrane 20 homolog (yeast) [Source:HGNC Symbol;Acc:20947] |
Percent Identity: | 73.33 % |
Parental protein coverage: | 63.04 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LPDLRDA-EAVQK-FLEEIQLEE-LLAXXEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTK |
L.DL.D..EA..K.F.E.IQL.E.......YEKG.DHLTNAIAVCGQPQQL.QVLQQ.LP.P.FQMLLTK | |
Retrocopy | LLDLKDM<EAFYKVFHEGIQLGE<RVTRPRYEKGMDHLTNAIAVCGQPQQLFQVLQQ-LPLPMFQMLLTK |
Parental | LPTISQRIVSAQSLAEDDVE |
L.TISQRIVSAQSLAE.DVE | |
Retrocopy | LLTISQRIVSAQSLAEGDVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |