RetrogeneDB ID: | retro_tsyr_1791 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_58902:5158..6374(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTSYG00000002194 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIF2A | ||
Ensembl ID: | ENSTSYG00000002115 | ||
Aliases: | None | ||
Description: | kinesin heavy chain member 2A [Source:HGNC Symbol;Acc:6318] |
Percent Identity: | 90.39 % |
Parental protein coverage: | 56.05 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SRRKSNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPLTTADPIDEH |
.RR.SNCVKE.EKLQEKREKRR.Q.QELREKRAQDVDATNPNYEIMCM..DFR.SLDYRPL.TADPIDEH | |
Retrocopy | ARRRSNCVKEAEKLQEKREKRRPQHQELREKRAQDVDATNPNYEIMCMVKDFRVSLDYRPLITADPIDEH |
Parental | RICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSAPNEMVYRF |
RICVCVRKRPLNKKET.MKDLDVITIPSKDVVMVHEPKQKVDL.RYLENQTF.FDYAFD.S.PNEMVYRF | |
Retrocopy | RICVCVRKRPLNKKETRMKDLDVITIPSKDVVMVHEPKQKVDLARYLENQTFHFDYAFDYSTPNEMVYRF |
Parental | TARPLVETIFERGMATCFAYGQ--TGSGKTHGD-FSGKNQDCSKGIYALAARDVFLMLKKPNYKKLELQV |
TARPLVETIFERGMATCFAYGQ...G...T.G...SGKNQDCSKGIYALAARDVFLMLKKPNYKKLELQV | |
Retrocopy | TARPLVETIFERGMATCFAYGQTGSGKTHTMGG>TSGKNQDCSKGIYALAARDVFLMLKKPNYKKLELQV |
Parental | YATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNSCRTSGQTSANAHS |
YATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKL.D.GNSCRTSGQTSANA.S | |
Retrocopy | YATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLNDLGNSCRTSGQTSANALS |
Parental | SRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHT |
SRSHAVFQIILRRKG.L.GKFSLIDLAGNER.ADTSS.DRQTRLEG.EINKSLLALKECIRALGRNKPHT | |
Retrocopy | SRSHAVFQIILRRKGELYGKFSLIDLAGNEREADTSSTDRQTRLEGTEINKSLLALKECIRALGRNKPHT |
Parental | PFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKEFGISPS |
PFRASKLTQVLRDSFIGENS.TCMIATISPGMASCENTLNTLRYANRV.E....P. | |
Retrocopy | PFRASKLTQVLRDSFIGENSCTCMIATISPGMASCENTLNTLRYANRVNELTVDPT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |