Parental gene:

KIF2A, ENSECAG00000019810

Aliases:None
Description:kinesin heavy chain member 2A [Source:HGNC Symbol;Acc:6318]
Organism:Horse (Equus caballus)
Coordinates:21:10929738..10958463(-)


>ENSECAG00000019810
ATGGTAACATCTTTAAATGAAGATAATGAAAGTGTAACTGTTGAATGGATAGAGAATGGAGACACGAAAGGCAAAGAGAT
CGACCTGGAGAGCATCTTTTCACTTAACCCTGACCTTGTACCTGATGAGGAAATTGAGCCCAGTCCAGAAACACCTCCAC
CTCCAACATCCTCAGCCAAAGTAAACAAAATTGTAAAGAATCGACGGACTGTGGCTTCTATTAAGAATGAGCCTCCTCCA
AGAGATAATAGAGTGGTTGGTTCTGCACGTGCACGGCCTAGTCAGCTTCCTGAGCAGTCTTCCTCTGCACAACAGAATGG
TAGTGTTTCAGATATATCTCCAGTTCAAGCTGCAAAAAAGGAATTTGGACCCCCTTCACGTAGAAAATCTAATTGTGTGA
AAGAAGTAGAAAAATTACAGGAAAAACGAGAAAAAAGGAGACTACAACAGCAAGAACTGAGAGAAAAGAGAGCCCAGGAT
GTTGATGCTACAAACCCAAATTATGAAATTATGTGTATGATCAGAGACTTTAGAGGAAGTTTGGATTATAGACCATTAAC
AACAGCAGATCCTATTGATGAACATAGGATATGTGTTTGTGTAAGAAAACGCCCACTCAATAAAAAAGAAACTCAAATGA
AAGATCTTGATGTAATCACAATCCCTAGTAAAGATGTTGTGATGGTACATGAACCAAAACAGAAAGTGGATTTAACAAGG
TACCTAGAAAACCAGACATTTCGCTTTGATTATGCCTTTGATGACTCAGCTCCTAATGAAATGGTTTACAGGTTTACAGC
TAGACCACTAGTGGAAACTATATTTGAGAGAGGAATGGCTACATGCTTTGCTTATGGACAGACTGGAAGTGGAAAAACTC
ATACTATGGGAGGTGACTTTTCAGGAAAGAATCAAGATTGTTCTAAAGGAATTTATGCATTAGCAGCTCGAGATGTGTTT
TTAATGCTAAAGAAACCAAACTACAAGAAGTTAGAACTTCAAGTATATGCAACCTTTTTTGAAATTTATAGTGGAAAGGT
GTTTGACTTACTAAACAGGAAAACAAAATTAAGAGTGCTGGAAGATGGAAAACAGCAGGTTCAAGTGGTCGGATTACAGG
AACGGGAGGTCAAATGTGTTGAAGATGTATTAAAACTCATTGACATAGGCAACAGTTGCAGAACATCCGGTCAAACATCT
GCAAATGCACATTCATCTCGGAGCCATGCGGTGTTTCAGATTATTCTTAGAAGGAAAGGAAAACTACATGGCAAATTTTC
TCTCATTGATTTGGCTGGAAATGAAAGAGGAGCTGATACTTCCAGTGCAGATAGGCAAACTAGGCTTGAAGGTGCTGAAA
TTAATAAAAGCCTTTTAGCACTCAAGGAGTGCATCAGAGCCTTAGGTAGAAATAAACCTCATACTCCTTTCAGAGCAAGT
AAACTCACTCAGGTGTTAAGAGATTCATTCATCGGTGAAAACTCTCGCACCTGCATGATTGCCACAATCTCTCCAGGAAT
GGCATCCTGTGAAAATACTCTTAATACATTAAGATATGCAAATAGGGTGAAAGAACTGACAGTGGATCCAACTGCTGCTG
GTGATGTCCGTCCAATAATGCACCATCCACCAAATCAGATTGATGACTTAGAGGCACAGTGGGGTGTGGGGAGTTCCCCG
CAGAGAGACGATTTAAAACTTCTTTGTGAGCAAAATGAAGAAGAGGTTTCTCCACAATTGTTCACTTTCCACGAAGCTGT
CTCACAGATGGTAGAAATGGAAGAACAAGTTGTAGAAGATCACAGGGCGGTGTTCCAGGAATCTATTCGATGGTTAGAAG
ATGAAAAGGCTCTTCTAGAAATGACTGAAGAAGTAGACTATGATGTAGATTCATACGCTACACAACTTGAAGCTATTCTT
GAGCAAAAAATAGACATTTTAACTGAACTGCGGGATAAAGTGAAATCTTTTCGTGCAGCTCTGCAAGAAGAAGAACAGGC
CAGCAAGCAAATCAACCCGAAGAGACCCCGAGCCCTTTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 7 .91 RPM
SRP021940_cerebellum 20 .36 RPM
SRP021940_embryo 56 .49 RPM
SRP021940_placental_villous 17 .37 RPM
SRP021940_synovial_membrane 11 .42 RPM
SRP021940_testis 45 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000009519 possible_ortholog 1 retrogene
retro_apla_3,
Bos taurus ENSBTAG00000015022 ortholog_one2one 1 retrogene
retro_btau_180,
Choloepus hoffmanni ENSCHOG00000007888 ortholog_one2one 1 retrogene
retro_chof_1348,
Cavia porcellus ENSCPOG00000009393 ortholog_one2one 1 retrogene
retro_cpor_72,
Dipodomys ordii ENSDORG00000006335 ortholog_one2one 1 retrogene
retro_dord_763,
Homo sapiens ENSG00000068796 ortholog_one2one 1 retrogene
retro_hsap_69,
Gorilla gorilla ENSGGOG00000004774 ortholog_one2one 1 retrogene
retro_ggor_68,
Macaca mulatta ENSMMUG00000000399 ortholog_one2one 1 retrogene
retro_mmul_145,
Monodelphis domestica ENSMODG00000019605 ortholog_one2one 1 retrogene
retro_mdom_242,
Mus musculus ENSMUSG00000021693 ortholog_one2one 1 retrogene
retro_mmus_68,
Nomascus leucogenys ENSNLEG00000002865 ortholog_one2one 1 retrogene
retro_nleu_2329,
Oryctolagus cuniculus ENSOCUG00000010466 ortholog_one2one 1 retrogene
retro_ocun_156,
Otolemur garnettii ENSOGAG00000000527 ortholog_one2one 5 retrogenes
retro_ogar_126, retro_ogar_3166, retro_ogar_3498, retro_ogar_3501, retro_ogar_672,
Ochotona princeps ENSOPRG00000011768 ortholog_one2one 1 retrogene
retro_opri_815,
Procavia capensis ENSPCAG00000005089 ortholog_one2one 1 retrogene
retro_pcap_22,
Rattus norvegicus ENSRNOG00000014000 ortholog_one2one 2 retrogenes
retro_rnor_1284, retro_rnor_47,
Sorex araneus ENSSARG00000007768 ortholog_one2one 1 retrogene
retro_sara_457,
Sarcophilus harrisii ENSSHAG00000001950 ortholog_one2one 1 retrogene
retro_shar_30,
Ictidomys tridecemlineatus ENSSTOG00000012710 ortholog_one2one 1 retrogene
retro_itri_40,
Tupaia belangeri ENSTBEG00000009396 ortholog_one2one 1 retrogene
retro_tbel_761,
Tarsius syrichta ENSTSYG00000002115 ortholog_one2one 1 retrogene
retro_tsyr_1791,
Vicugna pacos ENSVPAG00000008864 ortholog_one2one 1 retrogene
retro_vpac_572,
Drosophila melanogaster FBgn0030268 ortholog_many2many 2 retrogenes
retro_dmel_1, retro_dmel_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_32 74.44 59.35
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Download FASTA sequences of all ENSECAG00000019810 retrocopies