Parental gene:

KIF2A, ENSBTAG00000015022

Aliases:None
Description:kinesin-like protein KIF2A [Source:RefSeq peptide;Acc:NP_001070541]
Organism:Cow (Bos taurus)
Coordinates:20:17009552..17076650(-)


>ENSBTAG00000015022
ATGGCAACGGCCAACTTCGGCAAGATCCAGATCGGGATTTACGTGGAGATCAAGCGGAGCGATGGCCGAATACATCAAGC
AATGGTAACATCTTTAAATGAAGATAACGAAAGTGTAACTGTTGAGTGGATAGAAAATGGAGATACAAAAGGCAAAGAGA
TTGACCTGGAGAGCATTTTTTCACTTAACCCTGACCTTGTACCAGATGAAGATATTGAGCCCAGTCCAGAGACACCCCCA
CCTCCAACATCCTCAGCCAAAGTAAACAAAATTGTAAAGAATCGACGGACTGTGGCTTCTATTAAGAATGAGCCTCCTCC
AAGAGATAATAGAGTGGTTGGTTCTGCACGCGCACGGCCTAGTCAGCTTCCTGAACAGTCTTCCTCTGCACAGCAGAATG
GTAGTGTTTCAGATATATCTCCAGTTCAAGCTGCAAAAAAGGAATTTGGACCCCCTTCACGTAGAAAATCGAATTGTGTG
AAAGAGGTAGAGAAGTTGCAAGAAAAACGAGAAAAAAGGAGACTGCAACAGCAAGAACTTAGAGAAAAAAGAGCCCAGGA
TGTTGATGCTACAAACCCAAATTATGAAATTATGTGTATGATCAGAGACTTTAGAGGCAGTTTGGATTATAGACCGTTAA
CAACAGCAGATCCTATTGATGAACACAGGATATGTGTTTGTGTAAGAAAACGACCACTCAATAAAAAAGAAACTCAAATG
AAAGATCTTGATGTAATCACAATCCCTAGTAAAGATGTTGTGATGGTACATGAACCAAAACAAAAAGTAGATTTAACAAG
GTACCTAGAAAACCAAACATTTCGTTTTGATTATGCCTTTGATGACTCAGCTCCTAATGAAATGGTTTACAGGTTTACAG
CTAGACCACTAGTGGAAACTATATTTGAGAGGGGAATGGCTACATGCTTTGCTTATGGGCAGACTGGAAGTGGAAAGACT
CATACAATGGGAGGTGACTTTTCAGGAAAGAATCAAGATTGTTCTAAAGGAATTTATGCATTAGCAGCTCGGGATGTATT
TTTAATGCTAAAGAAGCCAAACTATAAGAAGTTGGAACTTCAAGTGTATGCAACCTTTTTTGAAATTTATAGTGGTAAGG
TGTTTGACTTGCTAAATAGGAAAACAAAATTAAGAGTGCTTGAAGATGGAAAACAGCAGGTTCAAGTGGTGGGATTACAG
GAACGGGAGGTCAAATGTGTTGAAGATGTACTAAAACTCATTGACATAGGCAACAGTTGCAGAACGTCCGGTCAGACATC
TGCAAATGCACATTCATCTCGGAGCCATGCAGTGTTTCAGATTATCCTTAGAAGGAAAGGAAAACTACATGGCAAATTTT
CTCTCATCGATTTGGCTGGAAATGAAAGAGGAGCTGATACTTCCAGTGCGGACAGGCAAACTAGGCTTGAAGGTGCTGAA
ATTAATAAAAGCCTTTTAGCACTCAAGGAGTGCATCAGAGCCTTAGGTAGAAATAAACCTCATACTCCTTTCCGAGCAAG
TAAACTCACTCAGGTGTTAAGAGATTCATTCATAGGTGAAAACTCTCGTACCTGCATGATTGCCACAATCTCTCCAGGAA
TGGCATCCTGTGAAAATACCCTCAATACATTAAGATATGCAAATAGAGTAAAGGAGTTTGGAATTAGTCCATCAGACATT
CCCTTCTCACAGGGTAGTGGCAGTCGCCCTGATCTCTCTCCTTCTTATGAGTATGACGACTTTTCTCCTTCGATTACCAG
GGTTAAAGAACTGACTGTGGATCCAACTGCTGCTGGTGACGTCCGTCCAATAATGCACCATCCCCCAAATCAGATTGATG
ACTTAGAGGCACAGTGGGGTGTGGGCAGTTCCCCTCAGAGGGATGATCTAAAACTTCTTTGTGAACAGAATGAAGAAGAG
GTTTCCCCACAGTTGTTTACTTTTCACGAAGCTGTCTCACAAATGGTAGAAATGGAAGAACAAGTTGTAGAAGATCACAG
GGCAGTATTCCAGGAATCTATCCGATGGTTAGAAGATGAAAAGGCTCTCCTAGAGATGACTGAAGAAGTAGACTATGATG
TGGATTCATATGCCACGCAACTTGAAGCTATTCTTGAGCAAAAAATAGACATTTTGACTGAACTGCGGGATAAAGTGAAA
TCTTTTCGTGCAGCTCTGCAAGAAGAAGAACAGGCCAGCAAGCAAATCAACCCGAAGAGACCCCGTGCCCTTTAA

Library Parental gene expression (RPM)
ERP005899_liver 5 .34 RPM
ERP005899_muscle 17 .31 RPM
SRP017611_brain 70 .39 RPM
SRP017611_kidney 25 .72 RPM
SRP017611_liver 6 .57 RPM
SRP030211_testis 128 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000009519 possible_ortholog 1 retrogene
retro_apla_3,
Choloepus hoffmanni ENSCHOG00000007888 ortholog_one2one 1 retrogene
retro_chof_1348,
Cavia porcellus ENSCPOG00000009393 ortholog_one2one 1 retrogene
retro_cpor_72,
Dipodomys ordii ENSDORG00000006335 ortholog_one2one 1 retrogene
retro_dord_763,
Equus caballus ENSECAG00000019810 ortholog_one2one 1 retrogene
retro_ecab_32,
Homo sapiens ENSG00000068796 ortholog_one2one 1 retrogene
retro_hsap_69,
Gorilla gorilla ENSGGOG00000004774 ortholog_one2one 1 retrogene
retro_ggor_68,
Macaca mulatta ENSMMUG00000000399 ortholog_one2one 1 retrogene
retro_mmul_145,
Monodelphis domestica ENSMODG00000019605 ortholog_one2one 1 retrogene
retro_mdom_242,
Mus musculus ENSMUSG00000021693 ortholog_one2one 1 retrogene
retro_mmus_68,
Nomascus leucogenys ENSNLEG00000002865 ortholog_one2one 1 retrogene
retro_nleu_2329,
Oryctolagus cuniculus ENSOCUG00000010466 ortholog_one2one 1 retrogene
retro_ocun_156,
Otolemur garnettii ENSOGAG00000000527 ortholog_one2one 5 retrogenes
retro_ogar_126, retro_ogar_3166, retro_ogar_3498, retro_ogar_3501, retro_ogar_672,
Ochotona princeps ENSOPRG00000011768 ortholog_one2one 1 retrogene
retro_opri_815,
Procavia capensis ENSPCAG00000005089 ortholog_one2one 1 retrogene
retro_pcap_22,
Rattus norvegicus ENSRNOG00000014000 ortholog_one2one 2 retrogenes
retro_rnor_1284, retro_rnor_47,
Sorex araneus ENSSARG00000007768 ortholog_one2one 1 retrogene
retro_sara_457,
Sarcophilus harrisii ENSSHAG00000001950 ortholog_one2one 1 retrogene
retro_shar_30,
Ictidomys tridecemlineatus ENSSTOG00000012710 ortholog_one2one 1 retrogene
retro_itri_40,
Tupaia belangeri ENSTBEG00000009396 ortholog_one2one 1 retrogene
retro_tbel_761,
Tarsius syrichta ENSTSYG00000002115 ortholog_one2one 1 retrogene
retro_tsyr_1791,
Vicugna pacos ENSVPAG00000008864 ortholog_one2one 1 retrogene
retro_vpac_572,
Drosophila melanogaster FBgn0030268 ortholog_many2many 2 retrogenes
retro_dmel_1, retro_dmel_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_180 73.20 61.06
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000015022 retrocopies