Parental gene:

KIF2A, ENSMMUG00000000399

Aliases:None
Description:kinesin-like protein KIF2A [Source:RefSeq peptide;Acc:NP_001253787]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:60038403..60119881(+)


>ENSMMUG00000000399
ATGGGCCGAATACATCAAGCAATGGTAACATCTTTAAATGAAGATAATGAAAGTGTAACTGTTGAATGGATAGAAAATGG
AGATACAAAAGGCAAAGAGATTGACCTGGAGAGCATCTTTTCACTTAACCCTGACCTTGTTCCTGATGAAGAAATTGAAC
CCAGTCCAGAAACACCTCCACCTCCAGCATCTTCAACCAAAGTAAACAAAATTGTAAAGAATCGACGGACTGTGGCTTCC
ATTAAGAATGACCCTCCTCCAAGAGATAATAGAGTGGTTGGTTCAGCACGTGCACGGCCCAGTCAATTTCCTGAACAGTC
TTCCTCTGCACAACAGAATGGTAGTGTTTCAGATATATCTCCAGTTCAAGCTGCAAAAAAGGAATTTGGACCCCCTTCAC
GTAGAAAATCTAATTGTGTGAAAGAAGTAGAAAAACTGCAAGAAAAACGAGAAAAAAGGAGATTGCAACAGCAAGAACTT
AGAGAAAAAAGAGCCCAGGACGTTGATGCTACGAACCCAAATTATGAAATTATGTGTATGATCAGAGACTTTAGAGGAAG
TTTGGATTATAGACCATTAACAACAGCAGATCCTATTGATGAACATAGGATATGTGTGTGTGTAAGAAAACGACCACTCA
ATAAAAAAGAAACACAAATGAAAGATCTTGATGTAATCACAATTCCGAGTAAAGATGTTGTGATGGTACATGAACCAAAA
CAAAAAGTAGATTTAACAAGATACCTAGAAAACCAAACATTTCGTTTTGATTATGCCTTTGATGACTCAGCTCCTAATGA
AATGGTTTACAGGTTTACTGCTAGACCACTAGTGGAAACTATATTTGAAAGAGGAATGGCTACATGCTTTGCTTATGGGC
AGACTGGAAGTGGAAAAACTCATACTATGGGTGGTGACTTTTCAGGAAAGAACCAAGATTGTTCTAAAGGAATTTATGCA
TTAGCAGCTCGAGATGTCTTTTTAATGCTAAAGAAGCCAAACTATAAGAAGCTAGAACTTCAAGTATATGCAACCTTCTT
TGAAATTTATAGTGGAAAGGTGTTTGACTTGCTAAATAGGAAAACAAAATTAAGAGTTCTAGAAGATGGAAAACAGCAGG
TTCAAGTGGTGGGATTACAGGAACGGGAGGTCAAATGTGTTGAAGATGTACTGAAACTCATTGACATAGGCAACAGTTGC
AGAACATCCGGTCAAACATCTGCAAATGCACATTCATCTCGGAGCCATGCAGTGTTTCAGATTATTCTTAGAAGGAAAGG
AAAACTACATGGCAAATTTTCTCTCATTGATTTGGCTGGAAATGAAAGAGGAGCTGATACTTCCAGTGCGGACAGGCAAA
CTAGGCTTGAAGGTGCTGAAATTAATAAAAGCCTTTTAGCACTCAAGGAGTGCATCAGAGCCTTAGGTAGAAATAAACCT
CATACTCCTTTCCGTGCAAGTAAACTCACTCAGGTGTTAAGAGATTCTTTCATAGGTGAAAACTCTCGTACCTGCATGAT
TGCCACAATCTCTCCAGGAATGGCATCCTGTGAAAATACTCTTAATACGTTAAGATATGCAAATAGGGTCAAAGAATTGA
CTGTAGATCCAACTGCTGCTGGTGATGTTCGTCCAATAATGCACCATCCACCAAACCAGATTGATGACTTAGAGACACAG
TGGGGTGTGGGGAGTTCCCCTCAGAGAGATGATCTAAAACTTCTTTGTGAACAAAATGAAGAAGAAGTTTCTCCACAACT
GTTTACTTTCCACGAAGCTGTCTCACAAATGGTAGAAATGGAAGAACAAGTTGTAGAAGATCACAGGGCAGTGTTCCAGG
AATCCATTCGGTGGTTAGAAGATGAAAAGGCTCTCTTAGAGATGACTGAAGAAGTAGACTATGATGTCGATTCATATGCC
ACACAACTAGAAGCTATTCTTGAGCAAAAAATAGACATTTTAACTGAGCTGCGGGACAAAGTGAAATCTTTCCGTGCAGC
TCTACAAGAAGAGGAACAAGCCAGCAAGCAAATCAACCCTAAGAGACCCCGTGCCCTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 83 .37 RPM
SRP007412_brain_prefrontal_cortex 57 .67 RPM
SRP007412_cerebellum 57 .02 RPM
SRP007412_heart 8 .60 RPM
SRP007412_kidney 15 .38 RPM
SRP007412_liver 4 .43 RPM
SRP007412_testis 87 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000009519 possible_ortholog 1 retrogene
retro_apla_3,
Bos taurus ENSBTAG00000015022 ortholog_one2one 1 retrogene
retro_btau_180,
Choloepus hoffmanni ENSCHOG00000007888 ortholog_one2one 1 retrogene
retro_chof_1348,
Cavia porcellus ENSCPOG00000009393 ortholog_one2one 1 retrogene
retro_cpor_72,
Dipodomys ordii ENSDORG00000006335 ortholog_one2one 1 retrogene
retro_dord_763,
Equus caballus ENSECAG00000019810 ortholog_one2one 1 retrogene
retro_ecab_32,
Homo sapiens ENSG00000068796 ortholog_one2one 1 retrogene
retro_hsap_69,
Gorilla gorilla ENSGGOG00000004774 ortholog_one2one 1 retrogene
retro_ggor_68,
Monodelphis domestica ENSMODG00000019605 ortholog_one2one 1 retrogene
retro_mdom_242,
Mus musculus ENSMUSG00000021693 ortholog_one2one 1 retrogene
retro_mmus_68,
Nomascus leucogenys ENSNLEG00000002865 ortholog_one2one 1 retrogene
retro_nleu_2329,
Oryctolagus cuniculus ENSOCUG00000010466 ortholog_one2one 1 retrogene
retro_ocun_156,
Otolemur garnettii ENSOGAG00000000527 ortholog_one2one 5 retrogenes
retro_ogar_126, retro_ogar_3166, retro_ogar_3498, retro_ogar_3501, retro_ogar_672,
Ochotona princeps ENSOPRG00000011768 ortholog_one2one 1 retrogene
retro_opri_815,
Procavia capensis ENSPCAG00000005089 ortholog_one2one 1 retrogene
retro_pcap_22,
Rattus norvegicus ENSRNOG00000014000 ortholog_one2one 2 retrogenes
retro_rnor_1284, retro_rnor_47,
Sorex araneus ENSSARG00000007768 ortholog_one2one 1 retrogene
retro_sara_457,
Sarcophilus harrisii ENSSHAG00000001950 ortholog_one2one 1 retrogene
retro_shar_30,
Ictidomys tridecemlineatus ENSSTOG00000012710 ortholog_one2one 1 retrogene
retro_itri_40,
Tupaia belangeri ENSTBEG00000009396 ortholog_one2one 1 retrogene
retro_tbel_761,
Tarsius syrichta ENSTSYG00000002115 ortholog_one2one 1 retrogene
retro_tsyr_1791,
Vicugna pacos ENSVPAG00000008864 ortholog_one2one 1 retrogene
retro_vpac_572,
Drosophila melanogaster FBgn0030268 ortholog_many2many 2 retrogenes
retro_dmel_1, retro_dmel_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_145 74.69 58.75
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Download FASTA sequences of all ENSMMUG00000000399 retrocopies