RetrogeneDB ID: | retro_tsyr_2161 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_97866:9581..10116(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7L1 | ||
Ensembl ID: | ENSTSYG00000004848 | ||
Aliases: | None | ||
Description: | ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370] |
Percent Identity: | 75.41 % |
Parental protein coverage: | 73.58 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | SVRLRRLEVKPHALELP-DKHSLAFVVRIQRIDGVSSLVQRTIARLHLKKIFSGVFVKVTPQRLKMLRIV |
SV.LRRLEVKPHAL.LP.DKHSLA.VV.IQRIDGVSS.VQRT.ARLHLKKIF.GVFV.VT....K.L.IV | |
Retrocopy | SVHLRRLEVKPHALKLP<DKHSLALVVCIQRIDGVSSWVQRTVARLHLKKIFRGVFVTVTS*NSKALCIV |
Parental | ETYVTCGFPNLKSVRELILKRGQARVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISW |
E.YVT..FPNLKS..E.ILKRGQ..VKNKTIPLTDN..IE.HL..F..IC.EDLIHEIA...KHFQE.SW | |
Retrocopy | ESYVTWKFPNLKSIWEFILKRGQ--VKNKTIPLTDNILIEKHLERFDGICWEDLIHEIALSEKHFQENSW |
Parental | F-LRPFQLSVARHATKNRVGFVKEMGSPGYRGERINQLIRLLN |
F.L..FQL.V.RHATKNRVGF.KEMGSPGY.GE.INQLI..LN | |
Retrocopy | F<LVSFQLLVDRHATKNRVGFLKEMGSPGYQGEHINQLIHQLN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |