RetrogeneDB ID: | retro_tsyr_724 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_18214:19506..20239(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTSYG00000006100 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 73.88 % |
Parental protein coverage: | 97.59 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | REKKKKVPAVPETLKKKRRNFAELKLKRL-RKKAQKMLRKARRKLIYEKA-KHYHKEYRQMYRTEIRMAR |
.EKKKKVPAVPETL....RNF.ELK.K...R....K.....R..L...K....YH.EYRQ.YR.EIRMAR | |
Retrocopy | KEKKKKVPAVPETLXXXQRNFTELKIKTCERSLSKKCFERQRGSLSMKKL>LYYHEEYRQVYRSEIRMAR |
Parental | MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWG |
MARKAGNFYVPAEPKL.FVI.IRGI.GVSPKV.KVLQLL.L.QIFN..FVKLN.AS.NML.IV.PYI.W. | |
Retrocopy | MARKAGNFYVPAEPKLVFVIKIRGISGVSPKVQKVLQLLCLHQIFNRNFVKLNRASVNMLKIVGPYITWM |
Parental | YPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKL |
YPN.KSVNELIYK.GY.KINKKR.ALTDN.LIARSLGKYGIIC..DLI.EIYTVGKRFKEANNFL..FKL | |
Retrocopy | YPNPKSVNELIYKHGYHKINKKRVALTDNGLIARSLGKYGIICLKDLIREIYTVGKRFKEANNFLQSFKL |
Parental | SSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
SSP.G.M.KKT.HFV.GGDA.NRE.QI.RL.RRMN | |
Retrocopy | SSPSGAMEKKTIHFVDGGDADNREGQIDRLTRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |