miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001002
species: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCTCTGTAAAGAAACATAA

miRNA*
 ATATTTCTTTATGGAGGGACT

mismatches: 1
bulges: 0
View larger
pre-miRNA
 TCAGTCTTAATTAGGTAGTACTCCCTCTGTAAAGAAACATAAGAGCGTTAGATCAAGAAAGTAGTGATTTAAATGCTCTTATATTTCTTTATGGAGGGAC
TACCAGCCTACTGCGCCAC

dot-bracket secondary structure
...........(((((.(((.((((((((((((((((.((((((((.((((((((.........))))))))..)))))))).)))))))))))))))).
)))..))))).........


SIMILARITIES
miRBase tae-MIR1121: 0.000000000000002

PMRD tae-miR1121: 0.000000000000002

microPC no hits		UniProt no hits

RFAM MIR1122: 3e-17		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;