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Species belonging to selected taxon:
Agrostis stolonifera
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST001002
species:
Hordeum vulgare
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCTCTGTAAAGAAACATAA
miRNA*
ATATTTCTTTATGGAGGGACT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TCAGTCTTAATTAGGTAGTAC
TCCCTCTGTAAAGAAACATAA
GAGCGTTAGATCAAGAAAGTAGTGATTTAAATGCTCTT
ATATTTCTTTATGGAGGGAC
T
ACCAGCCTACTGCGCCAC
dot-bracket secondary structure
...........(((((.(((.
((((((((((((((((.((((
((((.((((((((.........))))))))..))))))
)).)))))))))))))))).
)
))..))))).........
SIMILARITIES
miRBase
tae-MIR1121
:
0.000000000000002
PMRD
tae-miR1121
:
0.000000000000002
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 3e-17
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record