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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST001002
species: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCTCTGTAAAGAAACATAA

miRNA*
 ATATTTCTTTATGGAGGGACT

mismatches: 1
bulges: 0
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pre-miRNA
 CTCAGTCTTAATTAGGTAGTACTCCCTCTGTAAAGAAACATAAGAGCGTTAGATCAAGAAAGTAGTGATTTAAATGCTCTTATATTTCTTTATGGAGGGAC
TACCAGCCTACTGCGCCAC

dot-bracket secondary structure
)...........(((((.(((.((((((((((((((((.((((((((.((((((((.........))))))))..)))))))).)))))))))))))))).
)))..))))).........


SIMILARITIES
miRBase tae-MIR1121: 2.0E-15

PMRD tae-miR1121: 2.0E-15

microPC no hits		UniProt no hits

RFAM 2MIR1122: 3.0E-17		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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