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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST001007
species: Hordeum vulgare
miRNA family: MIR444
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCAGTTGTTGCCTCATGCTT

miRNA*
 GCTTGAGACAGCAACTGCACA

mismatches: 2
bulges: 0
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pre-miRNA
 CGGAGTCAGCAAGCTTGAGACAGCAACTGCACAACTTGCAAGAAAGTCACGATTATGAAGACCCATAGATTTTGTAACTTCCTTGAAAGTAATGCAGTTG
TTGCCTCATGCTTGGTGCCACC

dot-bracket secondary structure
.((...((.(((((.((((.(((((((((((..((((.((((.((((.(((((((((......)))))...)))).)))).)))).))))..))))))))
))).)))).))))).))))...


SIMILARITIES
miRBase hvu-MIR444b: 2e-64

PMRD tae-miR2024a: 4e-53

microPC miR444: 1e-53		UniProt no hits

RFAM MIR444: 0.0000000000005		most similar mature miRNAs

Identical with: hvu-MIR444b from miRBase (MNEST041894)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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