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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST001015
species: Hordeum vulgare
miRNA family: miR171e
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTTGGCTCGACTCACTCAGA

miRNA*
 TGATTGAGCCGTGCCAATATC

mismatches: 3
bulges: 0
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pre-miRNA
 GATGCTGAAACGGTCACTATGATGTTGGCTCGACTCACTCAGACCACGCCGGAGGGAGCCATCTGCGGCGGCGGTTCTGATTGAGCCGTGCCAATATCTT
AGTGCTCTTTCATGCAC

dot-bracket secondary structure
..((((((((.((.(((((.(((((((((.((.((((.(((((((.(((((.(((......))).)))))..)).))))).)))).)).))))))))).)
)))))).))))).))).


SIMILARITIES
miRBase hvu-MIR171: 7e-61

PMRD hvv-miR171: 9e-39

microPC miR171: 9e-39		UniProt no hits

RFAM MIR171_1: 0.000000000002		most similar mature miRNAs

Identical with: miR171 from microPC (MNEST046135)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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