ABOUT THIS RECORDspecies: Juglans hindsii x Juglans regia
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTTCCTACTCCTCCCATTCC miRNA* AATGGGAAGATAGGAAAGAAC mismatches: 1 bulges: 1 |
pre-miRNA
AAGTTCTTCGGAATGGGAAGATAGGAAAGAACCAAGGTGTTGTCAGAAACATCTTTGTTTTCTTTCCTTCTTTCCTACTCCTCCCATTCCATTGGTTT
dot-bracket secondary structure
.........(((((((((.(((((((((((((.((((((((......)))))))).))..........))))))))).)).)))))))))........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAGTTCTTCGGAATGGGAAGATAGGAAAGAACCAAGGTGTTGTCAGAAACATCTTTGTTTTCTTTCCTTCTTTCCTACTCCTCCCATTCCATTGGTTT
dot-bracket secondary structure
.........(((((((((.(((((((((((((.((((((((......)))))))).))..........))))))))).)).)))))))))........
SIMILARITIES| miRBase vvi-MIR482: 0.00002 PMRD vvi-miR482: 0.00002 microPC miR482: 1e-40 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR482 from microPC (MNEST044917) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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