miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Actinidia chinensis, Actinidia deliciosa, Actinidia eriantha



ABOUT THIS RECORD

ID: MNEST000013
species: Actinidia deliciosa
miRNA family: MIR1438
source: miRNEST

Taxonomy by NCBI:
Actinidia deliciosa Actinidia Actinidiaceae Ericales asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGGGTAATTTTATTATTTTTG

miRNA*
 AAAACGACAAGATAACCTTA

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TTTTATTTAAAAAAACGACAAGATAACCTTATTTTTAAGAATTTCATATTGTTTTCTTAACACACCAATTAAAATTAATAAATATTATCTTTTTTAAAAA
AATAATCTTATTTATTCACCTATATTATAAAATTAATTATTGATAAAAAAAATAAAAATGAGGTAGTTTACAAATAAATGGTATTTTGATTAAAAAAAGA
ATTTTTATTCATTTAATTGATGTATAGAGAAAAAAACTGAAAGCCCTAAATTTAAGGGTAATTTTATTATTTTTGTTAAAAAT

dot-bracket secondary structure
(((((.....(((((.((.(((((..(((((..((((....(((((.....(((((((...(((.((((((((...((((((.(((...((((((((.((
((((....((((((((....((.(((((...(((..(((((.........))))).)))...))))).))..)))))))).))))))..))))))))..)
)).))))))..)))))))).)))...)))))))....)))))....))))..)))))...))))).)).)))))..)))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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