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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001434
species: Lotus japonicus
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCTC

miRNA*
 TTGGAATGTGGTTTGATCCGAAA

mismatches: 3
bulges: 0
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pre-miRNA
 GCTTGTAATTGAAGACGGAAAGGGTGGTGTTTGGAATGTGGTTTGATCCGAAATCATTGTCTCTGCCCCATTTTTAACTTTGCTTGTTTTCAAAGAGAGT
GAAAGAGAGATCATATAGGAAAAAGGGTGTTTGGAATTAATGAGGTTTGATCCAAGATCATAACATCATCTCTTCCTTTTTCCTTGATTTCTGATTTATT
TTCATATACCTATCTCATCACTTCATGCATGGGATATTGAGACTGATCTCGGACCAGGCTTCATTCCTCACCCCTACCTTTCCCTTGTATAGAAGCA

dot-bracket secondary structure
((((.((..((..((.(((((((..((((...((((((.((((((.(((((.(((...(((((...((((..........(((.((........((((((
(((((((((((((...(((((((((((.....(((....((((.((((((((...))))).))).)))).))))))))))))))))))))))......))
))))).......)))).......)).))))))).....))))).))).))))).)))))).)))))).))))....))))))).)).)))).)))).


SIMILARITIES
miRBase mtr-MIR166f: 0.000000000001

PMRD mtr-miR166c: 0.00000000002

microPC miR166: 0.000000004		UniProt no hits

RFAM mir-166: 3e-16		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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