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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001438
species: Lotus japonicus
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACA

miRNA*
 TGCTCACTGCTCTCTCCGTCACC

mismatches: 1
bulges: 2
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pre-miRNA
 TTTTTTGTTTTCTGTTTTGGGACATAGAAATTGACAGAAGAGAGTGAGCACAGAGAGGCAAATTGTATAGGCATACACTATTGCTTTTGTGTGCTCACTG
CTCTCTCCGTCACCTTCCAGTGCCGGAAGTTTGCTTCATTCT

dot-bracket secondary structure
.(((((((.((((.....)))).))))))).((((.((((((((((((((((.((((((((..(((((....)))))...)))))))).)))))))))).
)))).)).)))).(((((......))))).............


SIMILARITIES
miRBase tcc-MIR156g: 1e-25

PMRD vvi-miR156b: 0.000000000008

microPC miR156: 0.00000000000003		UniProt no hits

RFAM mir-156: 0.000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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