ABOUT THIS RECORDspecies: Mimulus guttatus
miRNA family: MIR397
source: miRNEST
Taxonomy by NCBI:
Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGTTGAGTGCCGCGTTGATG miRNA* GCGTGTGGTTTGCGATGGCG mismatches: 5 bulges: 1 |
pre-miRNA
CCGCGTCGACTTCCACTACGGTTAGCGTGTGGTTTGCGATGGCGAAGAAGAGCTCGTCGTTGAGTGCCGCGTTGATGATCCGCAGGAGGTAGGTTTTG
dot-bracket secondary structure
.....((.((((((....((((((.((.(((((...(((((((((........)))))))))...)))))..)).))).)))..)))))).)).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CCGCGTCGACTTCCACTACGGTTAGCGTGTGGTTTGCGATGGCGAAGAAGAGCTCGTCGTTGAGTGCCGCGTTGATGATCCGCAGGAGGTAGGTTTTG
dot-bracket secondary structure
.....((.((((((....((((((.((.(((((...(((((((((........)))))))))...)))))..)).))).)))..)))))).)).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q5N9X2|LAC4_ORYSJ: 0.000000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
