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Species belonging to selected taxon:

Mimulus guttatus var. nasutus



ABOUT THIS RECORD

ID: MNEST001575
species: Mimulus guttatus var. nasutus
miRNA family: MIRf1449
source: miRNEST

Taxonomy by NCBI:
Mimulus guttatus var. nasutus Mimulus guttatus subsp. guttatus Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTGGAGGATTCGACGGTGCT

miRNA*
 CGTTGTCGTACGCTCTGGCTG

mismatches: 4
bulges: 0
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pre-miRNA
 AATGTCTCCCTGCTGGAGGATTCGACGGTGCTGCTCTGGCTGGGGCTGCGGATATTGGTGAAGAAACCATTGGCTTTGTTGATGTCCGTATCGGGCGGAG
GAAAATTCGTCTTGGCCTTGGAGCCGCGGAATCGGCGGGCGGCGTTGTCGTACGCTCTGGCTGCCTCCTCC

dot-bracket secondary structure
...........(((((((....((((((((((((((..(((((..((((((.((..(((.((((...(((((((...)))))))(((((.....))))).
((....)).)))).))).))...))))))..)))))))))))))))))))....)))))))..........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q9FE67|ERF80_ARATH: 0.000008

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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