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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST001575
species: Mimulus guttatus var. nasutus
miRNA family: MIRf1449
source: miRNEST

Taxonomy by NCBI:
Mimulus guttatus var. nasutus Mimulus guttatus subsp. guttatus Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTGGAGGATTCGACGGTGCT

miRNA*
 CGTTGTCGTACGCTCTGGCTG

mismatches: 4
bulges: 0
View larger
pre-miRNA
 AATGTCTCCCTGCTGGAGGATTCGACGGTGCTGCTCTGGCTGGGGCTGCGGATATTGGTGAAGAAACCATTGGCTTTGTTGATGTCCGTATCGGGCGGAG
GAAAATTCGTCTTGGCCTTGGAGCCGCGGAATCGGCGGGCGGCGTTGTCGTACGCTCTGGCTGCCTCCTCC

dot-bracket secondary structure
...........(((((((....((((((((((((((..(((((..((((((.((..(((.((((...(((((((...)))))))(((((.....))))).
((....)).)))).))).))...))))))..)))))))))))))))))))....)))))))..........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q9FE67|ERF80_ARATH: 0.000008

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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