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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST001796
species: Panicum virgatum
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGAAGCAGGGCACGTGCT

miRNA*
 CACGTGCGCTCCTTCTCCATC

mismatches: 2
bulges: 0
View larger
pre-miRNA
 GCCAATCTAGCTCATCTAGCATTCCATTTTTGCTTCAGTTGTTCGCAGTGCCTCATGAGGAGGGGCGAGCAAACCCCTGCTGGAGAAGCAGGGCACGTGC
TTGGTCGATCGGCCGGCAGCCCGCTGCATGTGTGCATGGTCGATCGCAGCACGTGCGCTCCTTCTCCATCATGGATTCTCGCCCCGTCGATCCATCTCGG
TTCGAACGCCCCCTAATAAGCTAATGGGTGGGAGAGCTAGCTCGATC

dot-bracket secondary structure
......(((((((.(((.....((((((...((((.((.((((((....(((..(((.((.((((((((..((.((.((.((((((((.((.((((((((
(..(.((((((((((...((.(((.....))).)).)))))))))))))))))))).)).)))))))).)).)).)))))))))).))....)))...))
).))))))....))...)))).))))))..)))))))))).......


SIMILARITIES
miRBase sbi-MIR164b: 0.000000000003

PMRD sbi-miR164b: 0.000000000003

microPC miR164: 0.0008		UniProt no hits

RFAM MIR164: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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