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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST001800
species: Panicum virgatum
miRNA family: miR827
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTGTTGGTGGTCATCTAACC

miRNA*
 TTAGATGACCATCAGCAAAC

mismatches: 0
bulges: 1
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pre-miRNA
 AGCTCCGAACTTGTTTTGTTGGTGGTCATCTAACCATGCTCCGATCCGGTGCATGGATCATGGATTGCGGTCATGACCCATGACCGTCATGGACTGATCA
TGGTCTTGCGTGCGCGGTTAGATGACCATCAGCAAACATGTTCATGAG

dot-bracket secondary structure
......((((.(((((.((((((((((((((((((.(((.(((...)))(((..(((((((((((.(((((((((...))))))))).)).......)))
)))))).))).))).))))))))))))))))))))))).)))).....


SIMILARITIES
miRBase bdi-MIR827: 0.000000002

PMRD osa-miR827b: 0.0000005

microPC miR827: 0.000002		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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