ABOUT THIS RECORDspecies: Picea glauca
miRNA family: MIRf621
source: miRNEST
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCACGTGCCCTGCTTCTCCA miRNA* GAGAAAAAGAGCACATGCATC mismatches: 5 bulges: 0 |
pre-miRNA
ATTCTGTAGAAATAGGTGGGTATTCCATGATGGAGAAAAAGAGCACATGCATCGGCAGTAGCCCATCACAGACTGCCTCGCACGTGCCCTGCTTCTCCAG
CATGTATAGCCCTCCCTATGACACTCAG
dot-bracket secondary structure
....(((....(((((.((((....((((.(((((((..((.((((.(((...((((((............))))))..))).)))).))..))))))).
))))....))))..))))).))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTCTGTAGAAATAGGTGGGTATTCCATGATGGAGAAAAAGAGCACATGCATCGGCAGTAGCCCATCACAGACTGCCTCGCACGTGCCCTGCTTCTCCAG
CATGTATAGCCCTCCCTATGACACTCAG
dot-bracket secondary structure
....(((....(((((.((((....((((.(((((((..((.((((.(((...((((((............))))))..))).)))).))..))))))).
))))....))))..))))).))).....
SIMILARITIES| miRBase sbi-MIR164b: 0.000006 PMRD sbi-miR164b: 0.000006 microPC miR164: 0.0004 | UniProt no hits RFAM MIR164: 0.000007 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
