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Species belonging to selected taxon:

Cryptomeria japonica, Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST001954
species: Picea glauca
miRNA family: MIRf621
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGCACGTGCCCTGCTTCTCCA

miRNA*
GAGAAAAAGAGCACATGCATC

mismatches: 5
bulges: 0

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pre-miRNA
ATTCTGTAGAAATAGGTGGGTATTCCATGATGGAGAAAAAGAGCACATGCATCGGCAGTAGCCCATCACAGACTGCCTCGCACGTGCCCTGCTTCTCCAG
CATGTATAGCCCTCCCTATGACACTCAG


dot-bracket secondary structure
....(((....(((((.((((....((((.(((((((..((.((((.(((...((((((............))))))..))).)))).))..))))))).
))))....))))..))))).))).....



SIMILARITIES
miRBase sbi-MIR164b: 0.000006

PMRD sbi-miR164b: 0.000006

microPC miR164: 0.0004
UniProt no hits

RFAM MIR164: 0.000007
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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