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Species belonging to selected taxon:
Picea sitchensis
ABOUT THIS RECORD
ID:
MNEST001993
species:
Picea sitchensis
miRNA family:
MIRf760
source:
miRNEST
Taxonomy by NCBI:
Picea sitchensis
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTTGGCAAGTTGTTCTTGCC
miRNA*
CTTGAAGTAACTTGTTTCTAA
mismatches:
4
bulges:
2
View larger
pre-miRNA
TAATGCCACATG
CTTGAAGTAACTTGTTTCTAA
GTTGATAAGTACGCAACATCTAAATCTATTTCTTTTTCACACTCAATGCTCTTGAATATGATATAAG
TGTGATTGCTTCTCTTCCATT
GGTTGGCAAGTTGTTCTTGCC
CTTGTTAAT
dot-bracket secondary structure
.......(((.(
(..(((.(((((((((.((((
...((.(((((....((((.((.(((...(((.....((.......)).....)))...))).)).)
)))...))))).)).....))
))..))))))))))))..)).
..)))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record