miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Pinus banksiana, Pinus banksiana, Pinus contorta, Pinus contorta, Pinus pinaster, Pinus pinaster, Pinus taeda, Pinus taeda



ABOUT THIS RECORD

ID: MNEST002020
species: Pinus banksiana
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Pinus banksiana Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTCCCTATTCCTCCCATT

miRNA*
 TGGGAGGGTAGGAGAAGGCT

mismatches: 0
bulges: 2
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pre-miRNA
 AAGTCTTGAGGAGTGGGAGGGTAGGAGAAGGCTCTGTGGTGAGGTCTCAGTCATAATCATCAGTCTTCCCTATTCCTCCCATTCCTATTGCCT

dot-bracket secondary structure
........(((((((((((((((((.(((((((.((..((((........))))...))..))))))))))).))))))))))))).......


SIMILARITIES
miRBase pta-MIR482c: 2e-33

PMRD pta-miR482c: 2e-33

microPC miR482: 0.00007		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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