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Species belonging to selected taxon:

Cryptomeria japonica, Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST002038
species: Pinus taeda
miRNA family: MIR951
source: miRNEST

Taxonomy by NCBI:
Pinus taeda Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTTCTTGACGTCTGGACCAC

miRNA*
 GGTTCAGTCATCAAGAACACC

mismatches: 4
bulges: 0
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pre-miRNA
 AAGAGGAAGAGGAAGCGATGGTGTTCTTGACGTCTGGACCACGAGGGTTTGCGTTACGTTGGGCATGAATAAACAATCATCTACCGCGGTTCAGTCATCA
AGAACACCTTTGCTTTCATTTACATG

dot-bracket secondary structure
..........((((((((.(((((((((((...(((((((.(((((..(((..(((..(((....))).))).)))...)))..)).)))))))...)))
)))))))).)))))))).........


SIMILARITIES
miRBase pta-MIR951: 4e-50

PMRD pta-miR951: 4e-50

microPC miR951: 4e-38		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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