miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cryptomeria japonica, Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST002038
species: Pinus taeda
miRNA family: MIR951
source: miRNEST

Taxonomy by NCBI:
Pinus taeda Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTTCTTGACGTCTGGACCAC

miRNA*
GGTTCAGTCATCAAGAACACC

mismatches: 4
bulges: 0

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pre-miRNA
AAGAGGAAGAGGAAGCGATGGTGTTCTTGACGTCTGGACCACGAGGGTTTGCGTTACGTTGGGCATGAATAAACAATCATCTACCGCGGTTCAGTCATCA
AGAACACC
TTTGCTTTCATTTACATG


dot-bracket secondary structure
..........((((((((.(((((((((((...(((((((.(((((..(((..(((..(((....))).))).)))...)))..)).)))))))...)))
))))))))
.)))))))).........



SIMILARITIES
miRBase pta-MIR951: 4e-50

PMRD pta-miR951: 4e-50

microPC miR951: 4e-38
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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