ABOUT THIS RECORDspecies: Populus tremula
miRNA family: MIR1132
source: miRNEST
Taxonomy by NCBI:
Populus tremula Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATTGTGGAACGGAAGGAGAA miRNA* TTTCCTTCATTAATCACGGTCGT mismatches: 4 bulges: 2 |
pre-miRNA
GGCATGGTGGAGATTGTGGAACGGAAGGAGAAATCATGTTTCCATCTGCTGAACCTAATTGTGCCAAGGCTAGGGTCATGATGGAGAAGGTTGTTTCCTT
CATTAATCACGGTCGTTAGGCCCT
dot-bracket secondary structure
(((........((((((((....((((((((((((...((((((((...(((.((((.((.......)).)))).))).)))))))).)))).)))))))
).....)))))))).....)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGCATGGTGGAGATTGTGGAACGGAAGGAGAAATCATGTTTCCATCTGCTGAACCTAATTGTGCCAAGGCTAGGGTCATGATGGAGAAGGTTGTTTCCTT
CATTAATCACGGTCGTTAGGCCCT
dot-bracket secondary structure
(((........((((((((....((((((((((((...((((((((...(((.((((.((.......)).)))).))).)))))))).)))).)))))))
).....)))))))).....)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
