ABOUT THIS RECORDspecies: Beta vulgaris
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Beta vulgaris Beta Amaranthaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATCT miRNA* AGTGGCGGTGGTGGTGGTGGTG mismatches: 2 bulges: 0 |
pre-miRNA
TTCAATGGCACAACTCCGTTACTCTCCTTTATCATCATCATCATCATCATCTCGTCAATTTTCTCTCTCCTCCATTAATCGGATTAATTCAATCTCATTC
CCTCTGAATCAATCTTTGAATCTCCAATCAAAATCCGCCACGTCAGATCATCTCCTTCACCTTTGCTTCTCCTCCAACAATGGCGGAAATGGCGGCGCAG
GATCCATCGGCGGAAGTGGCGGTGGTGGTGGTGGTGGTTGGAGTGGTGGAGATTCATCGGAAAA
dot-bracket secondary structure
(((.((((.....((((((((((((...(((((((((((((((((.((((.(((((.((..(((....((.(((((....(((((.(((((.........
....))))).)))))((((........))))..(((((((........................................)))))))))))).))....)
))...)).)))))..)))).)))))))))))))))))..))))))))))))..)))).)))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTCAATGGCACAACTCCGTTACTCTCCTTTATCATCATCATCATCATCATCTCGTCAATTTTCTCTCTCCTCCATTAATCGGATTAATTCAATCTCATTC
CCTCTGAATCAATCTTTGAATCTCCAATCAAAATCCGCCACGTCAGATCATCTCCTTCACCTTTGCTTCTCCTCCAACAATGGCGGAAATGGCGGCGCAG
GATCCATCGGCGGAAGTGGCGGTGGTGGTGGTGGTGGTTGGAGTGGTGGAGATTCATCGGAAAA
dot-bracket secondary structure
(((.((((.....((((((((((((...(((((((((((((((((.((((.(((((.((..(((....((.(((((....(((((.(((((.........
....))))).)))))((((........))))..(((((((........................................)))))))))))).))....)
))...)).)))))..)))).)))))))))))))))))..))))))))))))..)))).)))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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