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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000025
species: Agrostis stolonifera
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Agrostis stolonifera Agrostis Agrostidinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCCCTTCGTCCTAAAAT

miRNA*
 TTTAGGACGGAGGGAGT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TGAACAATATATATACTCCCTTCGTCCTAAAATATTTGTCAGAGATTTGTCTAAAGAAGTATGTATCTAAACATGTTTTAACTCTAGATACATCTATTTTT
TGACAAATCTCTGACAAGTATTTTAGGACGGAGGGAGT

dot-bracket secondary structure
).............(((((((((((((((((((((((((((((((((((((.((((.((.(((((((((.....((....))..))))))))))).)))).
.)))))))))))))))))))))))))))))))))))))


SIMILARITIES
miRBase tae-MIR1128: 7.0E-6

PMRD hpi-miR1122: 7.0E-9

microPC miR1135: 7.0E-6		UniProt no hits

RFAM 2MIR1122: 1.0E-7		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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