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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000025
species: Agrostis stolonifera
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Agrostis stolonifera Agrostis Agrostidinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCCCTTCGTCCTAAAAT

miRNA*
 TTTAGGACGGAGGGAGT

mismatches: 2
bulges: 0
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pre-miRNA
 GAACAATATATATACTCCCTTCGTCCTAAAATATTTGTCAGAGATTTGTCTAAAGAAGTATGTATCTAAACATGTTTTAACTCTAGATACATCTATTTTT
TGACAAATCTCTGACAAGTATTTTAGGACGGAGGGAGT

dot-bracket secondary structure
.............(((((((((((((((((((((((((((((((((((((.((((.((.(((((((((.....((....))..))))))))))).)))).
.)))))))))))))))))))))))))))))))))))))


SIMILARITIES
miRBase tae-MIR1128: 0.000007

PMRD hpi-miR1122: 0.000000007

microPC miR1135: 0.000007		UniProt no hits

RFAM MIR1122: 0.0000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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