miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000026
species: Agrostis stolonifera
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Agrostis stolonifera Agrostis Agrostidinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCCCTCCGTTCCAAAATAT

miRNA*
 ATTTTGAAACGGAGTGAGT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 ACAATCTTACTACTCCCTCCGTTCCAAAATATAAGATGTTTTAGCTTTGTGAAAAGAATATCTTATATTTTGAAACGGAGTGAGT

dot-bracket secondary structure
...........((((.(((((((.((((((((((((((((....((((....)))))))))))))))))))).))))))).))))


SIMILARITIES
miRBase osa-MIR1439: 0.00006

PMRD osa-miRf11780-akr: 0.000001

microPC miR1439: 0.00000000007		UniProt no hits

RFAM MIR1122: 0.00000007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;