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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000026
species: Agrostis stolonifera
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Agrostis stolonifera Agrostis Agrostidinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACTCCCTCCGTTCCAAAATAT

miRNA*
ATTTTGAAACGGAGTGAGT

mismatches: 2
bulges: 0

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pre-miRNA
ACAATCTTACTACTCCCTCCGTTCCAAAATATAAGATGTTTTAGCTTTGTGAAAAGAATATCTTATATTTTGAAACGGAGTGAGT

dot-bracket secondary structure
...........((((.(((((((.((((((((((((((((....((((....)))))))))))))))))))).))))))).))))


SIMILARITIES
miRBase osa-MIR1439: 0.00006

PMRD osa-miRf11780-akr: 0.000001

microPC miR1439: 0.00000000007
UniProt no hits

RFAM MIR1122: 0.00000007
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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