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Species belonging to selected taxon:
Barnadesia spinosa
,
Cichorium intybus
,
Gerbera hybrid cultivar
,
Guizotia abyssinica
,
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Lactuca perennis
,
Lactuca saligna
,
Lactuca sativa
,
Lactuca serriola
,
Lactuca virosa
,
Parthenium argentatum
,
Taraxacum kok-saghyz
,
Taraxacum officinale
,
Zinnia violacea
,
Carthamus tinctorius
,
Centaurea maculosa
,
Centaurea solstitialis
,
Cichorium endivia
,
Artemisia annua
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST002699
species:
Taraxacum officinale
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Taraxacum officinale
Taraxacum
Crepidinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTGCT
miRNA*
CAGATGAACTCGGGTGATGGGT
mismatches:
4
bulges:
1
View larger
pre-miRNA
CAATGACACTTGTGAATGCTCCTCCTGTTCAG
CAGATGAACTCGGGTGATGGGT
ATCAAGAA
TCATCATCATCATCATCTGCT
AATGGCCATGAACATCA
TACTAATTTGGA
dot-bracket secondary structure
......((....))..........(((((.((
(((((((.....((((((((..
........
))))))))....)))))))))
)))))..((((...)))
)...........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record