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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST002745
species: Trifolium pratense
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCGTCCCAAAATATAAGCA

miRNA*
 CTTATATTTTAGGACGGAGGG

mismatches: 1
bulges: 0
View larger
pre-miRNA
 CAAACATACTACTCCGTCCCAAAATATAAGCAAAAGGAGGTCAACAAAAGTGAATGTATCTGGACTAAATTTTAAACCAAATACATCAATTTTCATTGAC
CAATTTTTGCTTATATTTTAGGACGGAGGGAGTATTAT

dot-bracket secondary structure
.....(((((.((((((((.((((((((((((((((..((((((.((((.(((.(((((.(((.............))).)))))))).))))..)))))
)..)))))))))))))))).))))))))..)))))...


SIMILARITIES
miRBase no hits

PMRD osa-miRf10603-akr: 0.000007

microPC miR1439: 0.00003		UniProt no hits

RFAM MIR1122: 6e-22		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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