ABOUT THIS RECORDspecies: Trifolium pratense
miRNA family: MIRf1100
source: miRNEST
Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAGCATCACCTGTTCTGAAA miRNA* TCAGTCCAGGTGATGCTCCAT mismatches: 2 bulges: 0 |
pre-miRNA
GTTTGTTCCATGGAGCATCACCTGTTCTGAAATCTGTTTCAGTCCAGGTGATGCTCCATGGTGGTCT
dot-bracket secondary structure
.......(((((((((((((((((..((((((....))))))..)))))))))))))))))......
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTTTGTTCCATGGAGCATCACCTGTTCTGAAATCTGTTTCAGTCCAGGTGATGCTCCATGGTGGTCT
dot-bracket secondary structure
.......(((((((((((((((((..((((((....))))))..)))))))))))))))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
