miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST002746
species: Trifolium pratense
miRNA family: MIRf1100
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAGCATCACCTGTTCTGAAA

miRNA*
TCAGTCCAGGTGATGCTCCAT

mismatches: 2
bulges: 0

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pre-miRNA
GTTTGTTCCATGGAGCATCACCTGTTCTGAAATCTGTTTCAGTCCAGGTGATGCTCCATGGTGGTCT

dot-bracket secondary structure
.......(((((((((((((((((..((((((....))))))..)))))))))))))))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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