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Species belonging to selected taxon:

Actinidia chinensis, Actinidia deliciosa, Actinidia eriantha, Antirrhinum majus, Barnadesia spinosa, Cichorium intybus, Coffea canephora, Fraxinus excelsior, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Ipomoea batatas, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Panax ginseng, Parthenium argentatum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Taraxacum kok-saghyz, Taraxacum officinale, Triphysaria pusilla, Triphysaria versicolor, Zinnia violacea, Capsicum annuum, Carthamus tinctorius, Catharanthus roseus, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST002773
species: Triphysaria pusilla
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AATACTACCTCCGTCCCAAAA

miRNA*
 TTGGGACGGAGGGAGTATAAC

mismatches: 2
bulges: 0
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pre-miRNA
 TCAAACTTTAATACTACCTCCGTCCCAAAAGATTGTCCGGTTTTGACTTTTTCAAATATTTAAGAATTTATTGACTTTTATGATGTGAGATTGCGGCGGA
TGAAGACGTCAATGTCTCCCGCCACCGTCCTAGCATCGCGAGAGGGTATCTTTAGGATTTTGTTCAAAAAATAATCAAATTGGACTAGTTTTGGACTAGT
TTTGGGACACTAAAAAGTGTCAAAGTGGAAATCTTTTTGGGACGGAGGGAGTATAACTTTTCT

dot-bracket secondary structure
..........(((((.((((((((((((((((((.((((..((((((((((((((...............))))(((((.((((((.((..((.(((((.
...((((......)))).)))))..))..)).)))))).)))))(((.((((.((((((..((((((((..((.((......)).)).)))))))).)))
))))))).)))..)))).)))))).)))))))).)))))))))))))).))))).........


SIMILARITIES
miRBase tae-MIR1122: 0.00005

PMRD osa-miRf10322-akr: 0.000003

microPC miR1439: 0.00005		UniProt no hits

RFAM MIR1122: 0.00006		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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