miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST002778
species: Triticum monococcum
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATATTATGGGACGGAGGGA

miRNA*
 CCATCCGTCCCATAATATAA

mismatches: 3
bulges: 1
View larger
pre-miRNA
 GCCCCATCCGTCCCATAATATAAAAGTGTTTTTCACACTACACTAGTGACAAAAACGCTCTTATATTATGGGACGGAGGGA

dot-bracket secondary structure
..(((.(((((((((((((((((.(((((((((..(((((...)))))..))))))))).)))))))))))))))))))).


SIMILARITIES
miRBase hvu-MIR1120: 0.000000000001

PMRD tae-miR1120: 0.000000000004

microPC miR1439: 0.0000000000003		UniProt no hits

RFAM MIR1122: 5e-24		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;